HL_4V90_032
3D structure
- PDB id
- 4V90 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermus thermophilus Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.95 Å
Loop
- Sequence
- CAGCCGGUAG
- Length
- 10 nucleotides
- Bulged bases
- 4V90|1|AV|C|16, 4V90|1|AV|C|17, 4V90|1|AV|G|18, 4V90|1|AV|G|19, 4V90|1|AV|U|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_20811.2
- Basepair signature
- cWW-cWS-F
- Number of instances in this motif group
- 17
Unit IDs
4V90|1|AV|C|13
4V90|1|AV|A|14
4V90|1|AV|G|15
4V90|1|AV|C|16
4V90|1|AV|C|17
4V90|1|AV|G|18
4V90|1|AV|G|19
4V90|1|AV|U|20
4V90|1|AV|A|21
4V90|1|AV|G|22
Current chains
- Chain AV
- RNA (77-MER)
Nearby chains
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BC
- RIBOSOMAL PROTEIN L1
Coloring options: