HL_4V90_034
3D structure
- PDB id
- 4V90 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermus thermophilus Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.95 Å
Loop
- Sequence
- GUUCGAUUC
- Length
- 9 nucleotides
- Bulged bases (A, C, G, U)
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_22280.5
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 71
Unit IDs
4V90|1|AV|G|53
4V90|1|AV|U|54
4V90|1|AV|U|55
4V90|1|AV|C|56
4V90|1|AV|G|57
4V90|1|AV|A|58
4V90|1|AV|U|59
4V90|1|AV|U|60
4V90|1|AV|C|61
Current chains
- Chain AV
- RNA (77-MER)
Nearby chains
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BC
- RIBOSOMAL PROTEIN L1
Coloring options: