HL_4V90_115

3D structure

PDB id

4V90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

GGGGCCCACCAGCCUAC

Length

17 nucleotides

Bulged bases

4V90|1|BA|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V90|1|BA|G|880
4V90|1|BA|G|881
4V90|1|BA|G|882
4V90|1|BA|G|883
4V90|1|BA|C|884
4V90|1|BA|C|885
4V90|1|BA|C|886
4V90|1|BA|A|887
4V90|1|BA|C|888
4V90|1|BA|C|889
4V90|1|BA|A|890
4V90|1|BA|G|892
4V90|1|BA|C|893
4V90|1|BA|C|894
4V90|1|BA|U|895
4V90|1|BA|A|896
4V90|1|BA|C|897

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain AM

30S RIBOSOMAL PROTEIN S13

Chain AS

30S RIBOSOMAL PROTEIN S19

Chain BG

50S RIBOSOMAL PROTEIN L5

Chain BQ

50S RIBOSOMAL PROTEIN L16

Chain BZ

50S RIBOSOMAL PROTEIN L25