HL_4V92_016

3D structure

PDB id

4V92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGCCGGUCGGAUUUCC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V92|1|A2|G|651
4V92|1|A2|G|652
4V92|1|A2|C|653
4V92|1|A2|C|654
4V92|1|A2|G|655
4V92|1|A2|G|656
4V92|1|A2|U|657
4V92|1|A2|C|658
4V92|1|A2|G|676
4V92|1|A2|G|677
4V92|1|A2|A|678
4V92|1|A2|U|679
4V92|1|A2|U|680
4V92|1|A2|U|681
4V92|1|A2|C|682
4V92|1|A2|C|683

Current chains

Chain A2

18S RRNA

Nearby chains

Chain BE

ES4

Chain BJ

US4