HL_4V92_038

3D structure

PDB id

4V92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UAAAUACAAUUUUGAGAGGUUAAUAAAUUA

Length

30 nucleotides

Bulged bases

4V92|1|AZ|G|6057, 4V92|1|AZ|U|6063

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75842.1

Basepair signature

cWW-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R

Number of instances in this motif group

1

Unit IDs

4V92|1|AZ|U|6044
4V92|1|AZ|A|6045
4V92|1|AZ|A|6046
4V92|1|AZ|A|6047
4V92|1|AZ|U|6048
4V92|1|AZ|A|6049
4V92|1|AZ|C|6050
4V92|1|AZ|A|6051
4V92|1|AZ|A|6052
4V92|1|AZ|U|6053
4V92|1|AZ|U|6054
4V92|1|AZ|U|6055
4V92|1|AZ|U|6056
4V92|1|AZ|G|6057
4V92|1|AZ|A|6058
4V92|1|AZ|G|6059
4V92|1|AZ|A|6060
4V92|1|AZ|G|6061
4V92|1|AZ|G|6062
4V92|1|AZ|U|6063
4V92|1|AZ|U|6064
4V92|1|AZ|A|6065
4V92|1|AZ|A|6066
4V92|1|AZ|U|6067
4V92|1|AZ|A|6068
4V92|1|AZ|A|6069
4V92|1|AZ|A|6070
4V92|1|AZ|U|6071
4V92|1|AZ|U|6072
4V92|1|AZ|A|6073

Current chains

Chain AZ

RNA OF CRICKET-PARALYSIS-VIRUS-IRES

Nearby chains