HL_4V92_040

3D structure

PDB id

4V92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGCAGCCCC

Length

9 nucleotides

Bulged bases

4V92|1|AZ|C|6137, 4V92|1|AZ|C|6140

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89899.1

Basepair signature

cWW-R-R-R-R

Number of instances in this motif group

1

Unit IDs

4V92|1|AZ|G|6135
4V92|1|AZ|G|6136
4V92|1|AZ|C|6137
4V92|1|AZ|A|6138
4V92|1|AZ|G|6139
4V92|1|AZ|C|6140
4V92|1|AZ|C|6141
4V92|1|AZ|C|6142
4V92|1|AZ|C|6143

Current chains

Chain AZ

RNA OF CRICKET-PARALYSIS-VIRUS-IRES

Nearby chains

Chain BF

US7

Chain BZ

ES25