HL_4V92_046
3D structure
- PDB id
- 4V92 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UGACUCAACACG
- Length
- 12 nucleotides
- Bulged bases
- 4V92|1|A2|A|1196
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V92_046 not in the Motif Atlas
- Geometric match to HL_1KH6_003
- Geometric discrepancy: 0.1943
- The information below is about HL_1KH6_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33487.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
4V92|1|A2|U|1187
4V92|1|A2|G|1188
4V92|1|A2|A|1189
4V92|1|A2|C|1190
4V92|1|A2|U|1191
4V92|1|A2|C|1192
4V92|1|A2|A|1193
4V92|1|A2|A|1194
4V92|1|A2|C|1195
4V92|1|A2|A|1196
4V92|1|A2|C|1197
4V92|1|A2|G|1198
Current chains
- Chain A2
- 18S RRNA
Nearby chains
- Chain AZ
- Cripavirus internal ribosome entry site (IRES); CrPV IRES
- Chain BQ
- US9
- Chain BS
- US13
- Chain BT
- ES19
- Chain BU
- US10
- Chain Bd
- US14
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