HL_4V97_053

3D structure

PDB id

4V97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome ram mutation G299A.

Experimental method

X-RAY DIFFRACTION

Resolution

3.52 Å

Loop

Sequence

CGGGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V97_053 not in the Motif Atlas

Homologous match to HL_4WF9_016

Geometric discrepancy: 0.0977

The information below is about HL_4WF9_016

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

4V97|1|BA|C|487
4V97|1|BA|G|488
4V97|1|BA|G|489
4V97|1|BA|G|491
4V97|1|BA|A|492
4V97|1|BA|G|493

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BW

50S RIBOSOMAL PROTEIN L22