HL_4V97_091

3D structure

PDB id

4V97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome ram mutation G299A.

Experimental method

X-RAY DIFFRACTION

Resolution

3.52 Å

Loop

Sequence

GGACGGAAAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V97_091 not in the Motif Atlas

Homologous match to HL_7RQB_055

Geometric discrepancy: 0.362

The information below is about HL_7RQB_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11805.3

Basepair signature

cWW-F-F-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

4V97|1|BA|G|2303
4V97|1|BA|G|2304
4V97|1|BA|A|2305
4V97|1|BA|C|2306
4V97|1|BA|G|2307
4V97|1|BA|G|2308
4V97|1|BA|A|2309
4V97|1|BA|A|2310
4V97|1|BA|A|2311
4V97|1|BA|U|2312
4V97|1|BA|C|2313

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BB

5S ribosomal RNA; 5S rRNA

Chain BG

50S RIBOSOMAL PROTEIN L5