HL_4V97_157

3D structure

PDB id

4V97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome ram mutation G299A.

Experimental method

X-RAY DIFFRACTION

Resolution

3.52 Å

Loop

Sequence

GUUCGUGGAGC

Length

11 nucleotides

Bulged bases

4V97|1|DA|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V97_157 not in the Motif Atlas

Homologous match to HL_7RQB_013

Geometric discrepancy: 0.0842

The information below is about HL_7RQB_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.4

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

4V97|1|DA|G|382
4V97|1|DA|U|383
4V97|1|DA|U|384
4V97|1|DA|C|385
4V97|1|DA|G|386
4V97|1|DA|U|387
4V97|1|DA|G|388
4V97|1|DA|G|389
4V97|1|DA|A|390
4V97|1|DA|G|391
4V97|1|DA|C|392

Current chains

Chain DA

23S rRNA

Nearby chains

Chain D1

50S RIBOSOMAL PROTEIN L28

Chain DP

50S RIBOSOMAL PROTEIN L15