HL_4V97_227

3D structure

PDB id

4V97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome ram mutation G299A.

Experimental method

X-RAY DIFFRACTION

Resolution

3.52 Å

Loop

Sequence

CCUACGGG

Length

8 nucleotides

Bulged bases

4V97|1|CA|A|1447, 4V97|1|CA|C|1452

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V97_227 not in the Motif Atlas

Geometric match to HL_1FIR_001

Geometric discrepancy: 0.3437

The information below is about HL_1FIR_001

Detailed Annotation

tRNA D-loop

Broad Annotation

No text annotation

Motif group

HL_20811.1

Basepair signature

cWW-cWS-F

Number of instances in this motif group

18

Unit IDs

4V97|1|CA|C|1444
4V97|1|CA|C|1445
4V97|1|CA|U|1446
4V97|1|CA|A|1447
4V97|1|CA|C|1452
4V97|1|CA|G|1456
4V97|1|CA|G|1457
4V97|1|CA|G|1458

Current chains

Chain CA

16S rRNA

Nearby chains

Chain CT

30S ribosomal protein S20