HL_4V9B_181

3D structure

PDB id

4V9B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the 70S ribosome with tigecycline.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGGGAUGACCC

Length

11 nucleotides

Bulged bases

4V9B|1|DA|A|1177

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9B|1|DA|G|1169
4V9B|1|DA|G|1170
4V9B|1|DA|G|1171
4V9B|1|DA|G|1173
4V9B|1|DA|A|1174
4V9B|1|DA|U|1175
4V9B|1|DA|G|1176
4V9B|1|DA|A|1177
4V9B|1|DA|C|1178
4V9B|1|DA|C|1179
4V9B|1|DA|C|1180

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain D2

50S ribosomal protein L21