HL_4V9D_047

3D structure

PDB id

4V9D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of the bacterial ribosome in classical and hybrid states of tRNA binding

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AGUUAAUACCU

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9D_047 not in the Motif Atlas

Geometric match to HL_1KH6_003

Geometric discrepancy: 0.3165

The information below is about HL_1KH6_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.1

Basepair signature

cWW-cWW

Number of instances in this motif group

2

Unit IDs

4V9D|1|BA|A|461
4V9D|1|BA|G|462
4V9D|1|BA|U|463
4V9D|1|BA|U|464
4V9D|1|BA|A|465
4V9D|1|BA|A|466
4V9D|1|BA|U|467
4V9D|1|BA|A|468
4V9D|1|BA|C|469
4V9D|1|BA|C|470
4V9D|1|BA|U|471

Current chains

Chain BA

16S rRNA

Nearby chains