HL_4V9D_066

3D structure

PDB id

4V9D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of the bacterial ribosome in classical and hybrid states of tRNA binding

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

4V9D|1|BA|U|1451

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9D_066 not in the Motif Atlas

Homologous match to HL_4LFB_031

Geometric discrepancy: 0.1458

The information below is about HL_4LFB_031

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

60

Unit IDs

4V9D|1|BA|C|1449
4V9D|1|BA|U|1450
4V9D|1|BA|U|1451
4V9D|1|BA|C|1452
4V9D|1|BA|G|1453
4V9D|1|BA|G|1454

Current chains

Chain BA

16S rRNA

Nearby chains