HL_4V9D_090

3D structure

PDB id

4V9D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of the bacterial ribosome in classical and hybrid states of tRNA binding

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UUAACUG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9D_090 not in the Motif Atlas

Homologous match to HL_5J7L_153

Geometric discrepancy: 0.0991

The information below is about HL_5J7L_153

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13529.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

2

Unit IDs

4V9D|1|CA|U|641
4V9D|1|CA|U|642
4V9D|1|CA|A|643
4V9D|1|CA|A|644
4V9D|1|CA|C|645
4V9D|1|CA|U|646
4V9D|1|CA|G|647

Current chains

Chain CA

23S rRNA

Nearby chains

Chain C1

50S ribosomal protein L33

Chain C3

50S ribosomal protein L35