HL_4V9D_164

3D structure

PDB id

4V9D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of the bacterial ribosome in classical and hybrid states of tRNA binding

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UGAAAGG

Length

7 nucleotides

Bulged bases

4V9D|1|DA|A|781, 4V9D|1|DA|G|784

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9D_164 not in the Motif Atlas

Homologous match to HL_5J7L_156

Geometric discrepancy: 0.1673

The information below is about HL_5J7L_156

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87954.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

7

Unit IDs

4V9D|1|DA|U|779
4V9D|1|DA|G|780
4V9D|1|DA|A|781
4V9D|1|DA|A|782
4V9D|1|DA|A|783
4V9D|1|DA|G|784
4V9D|1|DA|G|785

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DC

50S ribosomal protein L2