HL_4V9D_228

3D structure

PDB id

4V9D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of the bacterial ribosome in classical and hybrid states of tRNA binding

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AUGUUGGCUUAGAAGCAGCCAUCAU

Length

25 nucleotides

Bulged bases

4V9D|1|DA|A|1067

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9D|1|DA|A|1057
4V9D|1|DA|U|1058
4V9D|1|DA|G|1059
4V9D|1|DA|U|1060
4V9D|1|DA|U|1061
4V9D|1|DA|G|1062
4V9D|1|DA|G|1063
4V9D|1|DA|C|1064
4V9D|1|DA|U|1065
4V9D|1|DA|U|1066
4V9D|1|DA|A|1067
4V9D|1|DA|G|1068
4V9D|1|DA|A|1069
4V9D|1|DA|A|1070
4V9D|1|DA|G|1071
4V9D|1|DA|C|1072
4V9D|1|DA|A|1073
4V9D|1|DA|G|1074
4V9D|1|DA|C|1075
4V9D|1|DA|C|1076
4V9D|1|DA|A|1077
4V9D|1|DA|U|1078
4V9D|1|DA|C|1079
4V9D|1|DA|A|1080
4V9D|1|DA|U|1081

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DI

50S ribosomal protein L11

Chain DM

50S ribosomal protein L16