HL_4V9F_047
3D structure
- PDB id
- 4V9F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The re-refined crystal structure of the Haloarcula marismortui large ribosomal subunit at 2.4 Angstrom resolution: more complete structure of the L7/L12 and L1 stalk, L5 and LX proteins
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- UCUAGUAACAA
- Length
- 11 nucleotides
- Bulged bases
- 4V9F|1|0|A|1836, 4V9F|1|0|G|1837, 4V9F|1|0|U|1838, 4V9F|1|0|A|1842
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87681.1
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
4V9F|1|0|U|1833
4V9F|1|0|C|1834
4V9F|1|0|U|1835
4V9F|1|0|A|1836
4V9F|1|0|G|1837
4V9F|1|0|U|1838
4V9F|1|0|A|1839
4V9F|1|0|A|1840
4V9F|1|0|C|1841
4V9F|1|0|A|1842
4V9F|1|0|A|1843
Current chains
- Chain 0
- 23S Ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L37e
- Chain A
- 50S ribosomal protein L2P
Coloring options: