HL_4V9H_025

3D structure

PDB id

4V9H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase state

Experimental method

X-RAY DIFFRACTION

Resolution

2.86 Å

Loop

Sequence

GUUCGGC

Length

7 nucleotides

Bulged bases

4V9H|1|AA|U|1136

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9H_025 not in the Motif Atlas

Geometric match to HL_1WZ2_007

Geometric discrepancy: 0.2951

The information below is about HL_1WZ2_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

4V9H|1|AA|G|1134
4V9H|1|AA|U|1135
4V9H|1|AA|U|1136
4V9H|1|AA|C|1137
4V9H|1|AA|G|1138
4V9H|1|AA|G|1139
4V9H|1|AA|C|1140

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AI

30S ribosomal protein S9