HL_4V9H_102

3D structure

PDB id

4V9H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase state

Experimental method

X-RAY DIFFRACTION

Resolution

2.86 Å

Loop

Sequence

GGCGAAGCC

Length

9 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9H_102 not in the Motif Atlas

Geometric match to HL_7UQ6_001

Geometric discrepancy: 0.3361

The information below is about HL_7UQ6_001

Detailed Annotation

tRNA D-loop

Broad Annotation

No text annotation

Motif group

HL_20811.4

Basepair signature

cWW-cWS-F

Number of instances in this motif group

14

Unit IDs

4V9H|1|BA|G|2792
4V9H|1|BA|G|2793
4V9H|1|BA|C|2794
4V9H|1|BA|G|2795
4V9H|1|BA|A|2801
4V9H|1|BA|A|2801|||A
4V9H|1|BA|G|2802
4V9H|1|BA|C|2803
4V9H|1|BA|C|2804

Current chains

Chain BA

23S ribosomal RNA

Nearby chains