HL_4V9N_012

3D structure

PDB id

4V9N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CGAGGAG

Length

7 nucleotides

Bulged bases

4V9N|1|AA|G|458|||C

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9N_012 not in the Motif Atlas

Homologous match to HL_4LFB_012

Geometric discrepancy: 0.1885

The information below is about HL_4LFB_012

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

4V9N|1|AA|C|458
4V9N|1|AA|G|458|||A
4V9N|1|AA|A|458|||B
4V9N|1|AA|G|458|||C
4V9N|1|AA|G|458|||D
4V9N|1|AA|A|458|||E
4V9N|1|AA|G|474

Current chains

Chain AA

16S rRNA (1504-MER)

Nearby chains

Chain AP

30S ribosomal protein S16