3D structure

PDB id
4V9N (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.
Experimental method
X-RAY DIFFRACTION
Resolution
3.4 Å

Loop

Sequence
UUGG
Length
4 nucleotides
Bulged bases
None detected
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4V9N_194 not in the Motif Atlas
Geometric match to HL_5NFV_001
Geometric discrepancy: 0.2759
The information below is about HL_5NFV_001
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_69752.2
Basepair signature
cWW-F
Number of instances in this motif group
7

Unit IDs

4V9N|1|DA|U|2098
4V9N|1|DA|U|2099
4V9N|1|DA|G|2190
4V9N|1|DA|G|2191

Current chains

Chain DA
23S ribosomal RNA

Nearby chains

Chain DI
50S ribosomal protein L9

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.2986 s