HL_4V9N_210

3D structure

PDB id

4V9N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CGUCAAG

Length

7 nucleotides

Bulged bases

4V9N|1|DA|U|2794|||B

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9N_210 not in the Motif Atlas

Geometric match to HL_1P6V_001

Geometric discrepancy: 0.3965

The information below is about HL_1P6V_001

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_53890.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

15

Unit IDs

4V9N|1|DA|C|2794
4V9N|1|DA|G|2794|||A
4V9N|1|DA|U|2794|||B
4V9N|1|DA|C|2794|||C
4V9N|1|DA|A|2794|||D
4V9N|1|DA|A|2794|||E
4V9N|1|DA|G|2802

Current chains

Chain DA

23S ribosomal RNA

Nearby chains