HL_4V9N_211

3D structure

PDB id

4V9N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GAAGACUAC

Length

9 nucleotides

Bulged bases

4V9N|1|DA|A|2820

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9N_211 not in the Motif Atlas

Homologous match to HL_7RQB_068

Geometric discrepancy: 0.1129

The information below is about HL_7RQB_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.1

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

4V9N|1|DA|G|2819
4V9N|1|DA|A|2820
4V9N|1|DA|A|2821
4V9N|1|DA|G|2822
4V9N|1|DA|A|2823
4V9N|1|DA|C|2824
4V9N|1|DA|U|2825
4V9N|1|DA|A|2826
4V9N|1|DA|C|2827

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain DE

50S ribosomal protein L3

Chain DR

50S ribosomal protein L17