HL_4V9N_220

3D structure

PDB id

4V9N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GUUCGGC

Length

7 nucleotides

Bulged bases

4V9N|1|AA|U|1136, 4V9N|1|AA|C|1137

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9N_220 not in the Motif Atlas

Homologous match to HL_4LFB_026

Geometric discrepancy: 0.2557

The information below is about HL_4LFB_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_92935.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

5

Unit IDs

4V9N|1|AA|G|1134
4V9N|1|AA|U|1135
4V9N|1|AA|U|1136
4V9N|1|AA|C|1137
4V9N|1|AA|G|1138
4V9N|1|AA|G|1139
4V9N|1|AA|C|1140

Current chains

Chain AA

16S rRNA (1504-MER)

Nearby chains