3D structure

PDB id
4V9N (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.
Experimental method
X-RAY DIFFRACTION
Resolution
3.4 Å

Loop

Sequence
CUUCGG
Length
6 nucleotides
Bulged bases
4V9N|1|CA|U|421
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4V9N_241 not in the Motif Atlas
Homologous match to HL_4LFB_011
Geometric discrepancy: 0.1899
The information below is about HL_4LFB_011
Detailed Annotation
UNCG
Broad Annotation
No text annotation
Motif group
HL_61337.3
Basepair signature
cWW-tSW-F
Number of instances in this motif group
62

Unit IDs

4V9N|1|CA|C|419
4V9N|1|CA|U|420
4V9N|1|CA|U|421
4V9N|1|CA|C|422
4V9N|1|CA|G|423
4V9N|1|CA|G|424

Current chains

Chain CA
16S rRNA (1504-MER)

Nearby chains

Chain CC
30S ribosomal protein S3
Chain CD
30S ribosomal protein S4

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.2523 s