HL_4V9O_152

3D structure

PDB id

4V9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

4V9O|1|CA|U|1955

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9O_152 not in the Motif Atlas

Homologous match to HL_7RQB_049

Geometric discrepancy: 0.0725

The information below is about HL_7RQB_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51824.1

Basepair signature

cWW-F-F-tSH-F-F

Number of instances in this motif group

8

Unit IDs

4V9O|1|CA|G|1949
4V9O|1|CA|G|1950
4V9O|1|CA|U|1951
4V9O|1|CA|A|1952
4V9O|1|CA|A|1953
4V9O|1|CA|G|1954
4V9O|1|CA|U|1955
4V9O|1|CA|U|1956
4V9O|1|CA|C|1957

Current chains

Chain CA

23S rRNA

Nearby chains

Chain CK

50S ribosomal protein L14

Chain DA

Small subunit ribosomal RNA; SSU rRNA