HL_4V9O_213

3D structure

PDB id

4V9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

4V9O|1|EA|A|196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9O_213 not in the Motif Atlas

Homologous match to HL_5J7L_139

Geometric discrepancy: 0.0532

The information below is about HL_5J7L_139

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

4V9O|1|EA|G|194
4V9O|1|EA|A|195
4V9O|1|EA|A|196
4V9O|1|EA|A|197
4V9O|1|EA|C|198
4V9O|1|EA|A|199
4V9O|1|EA|U|200
4V9O|1|EA|C|201

Current chains

Chain EA

23S rRNA

Nearby chains

Chain EL

50S ribosomal protein L15

Chain EX

50S ribosomal protein L28