HL_4V9O_310

3D structure

PDB id

4V9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GGGAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9O_310 not in the Motif Atlas

Homologous match to HL_6CZR_103

Geometric discrepancy: 0.1252

The information below is about HL_6CZR_103

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

4V9O|1|FA|G|1515
4V9O|1|FA|G|1516
4V9O|1|FA|G|1517
4V9O|1|FA|A|1518
4V9O|1|FA|A|1519
4V9O|1|FA|C|1520

Current chains

Chain FA

16S rRNA

Nearby chains

Chain EA

Large subunit ribosomal RNA; LSU rRNA