HL_4V9O_392

3D structure

PDB id

4V9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

4V9O|1|HA|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9O_392 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.1393

The information below is about HL_5J7L_012

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

4V9O|1|HA|G|462
4V9O|1|HA|U|463
4V9O|1|HA|U|464
4V9O|1|HA|A|465
4V9O|1|HA|A|466
4V9O|1|HA|U|467
4V9O|1|HA|A|468
4V9O|1|HA|C|469
4V9O|1|HA|C|470

Current chains

Chain HA

16S rRNA

Nearby chains