HL_4V9O_412

3D structure

PDB id

4V9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUUUAAG

Length

7 nucleotides

Bulged bases

4V9O|1|AA|U|2797, 4V9O|1|AA|A|2800

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9O_412 not in the Motif Atlas

Homologous match to HL_5J7L_200

Geometric discrepancy: 0.2504

The information below is about HL_5J7L_200

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

4V9O|1|AA|C|2795
4V9O|1|AA|U|2796
4V9O|1|AA|U|2797
4V9O|1|AA|U|2798
4V9O|1|AA|A|2799
4V9O|1|AA|A|2800
4V9O|1|AA|G|2801

Current chains

Chain AA

23S rRNA

Nearby chains