HL_4V9O_413
3D structure
- PDB id
- 4V9O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Control of ribosomal subunit rotation by elongation factor G
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- ACCCCAUGCCGAACU
- Length
- 15 nucleotides
- Bulged bases
- 4V9O|1|AB|G|41
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V9O_413 not in the Motif Atlas
- Homologous match to HL_5J7L_215
- Geometric discrepancy: 0.1076
- The information below is about HL_5J7L_215
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97756.2
- Basepair signature
- cWW-cSH-cWS-F-tSW-cSW-F-cWW-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
4V9O|1|AB|A|34
4V9O|1|AB|C|35
4V9O|1|AB|C|36
4V9O|1|AB|C|37
4V9O|1|AB|C|38
4V9O|1|AB|A|39
4V9O|1|AB|U|40
4V9O|1|AB|G|41
4V9O|1|AB|C|42
4V9O|1|AB|C|43
4V9O|1|AB|G|44
4V9O|1|AB|A|45
4V9O|1|AB|A|46
4V9O|1|AB|C|47
4V9O|1|AB|U|48
Current chains
- Chain AB
- 5S rRNA
Nearby chains
- Chain AA
- Large subunit ribosomal RNA; LSU rRNA
- Chain AF
- 50S ribosomal protein L5
- Chain AO
- 50S ribosomal protein L18
Coloring options: