HL_4V9O_415

3D structure

PDB id

4V9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UUUCGA

Length

6 nucleotides

Bulged bases

4V9O|1|CA|U|138, 4V9O|1|CA|U|139, 4V9O|1|CA|C|140, 4V9O|1|CA|G|141

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9O_415 not in the Motif Atlas

Homologous match to HL_5J7L_137

Geometric discrepancy: 0.5828

The information below is about HL_5J7L_137

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32392.1

Basepair signature

cWW-F-F

Number of instances in this motif group

2

Unit IDs

4V9O|1|CA|U|137
4V9O|1|CA|U|138
4V9O|1|CA|U|139
4V9O|1|CA|C|140
4V9O|1|CA|G|141
4V9O|1|CA|A|142

Current chains

Chain CA

23S rRNA

Nearby chains

Chain CT

50S ribosomal protein L23