HL_4V9P_003

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

4V9P|1|AA|A|125, 4V9P|1|AA|A|126, 4V9P|1|AA|A|127

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9P_003 not in the Motif Atlas

Homologous match to HL_4WF9_003

Geometric discrepancy: 0.1301

The information below is about HL_4WF9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

4V9P|1|AA|G|123
4V9P|1|AA|G|124
4V9P|1|AA|A|125
4V9P|1|AA|A|126
4V9P|1|AA|A|127
4V9P|1|AA|C|128

Current chains

Chain AA

23S rRNA

Nearby chains

Chain A2

50S ribosomal protein L34

Chain AT

50S ribosomal protein L23