HL_4V9P_027

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GAAACAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9P_027 not in the Motif Atlas

Homologous match to HL_7A0S_027

Geometric discrepancy: 0.148

The information below is about HL_7A0S_027

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47171.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

4V9P|1|AA|G|978
4V9P|1|AA|A|979
4V9P|1|AA|A|980
4V9P|1|AA|A|981
4V9P|1|AA|C|982
4V9P|1|AA|A|983
4V9P|1|AA|A|984
4V9P|1|AA|C|985

Current chains

Chain AA

23S rRNA

Nearby chains

Chain AQ

50S ribosomal protein L20

Chain AR

50S ribosomal protein L21