HL_4V9P_053

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

4V9P|1|AA|G|2250

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9P_053 not in the Motif Atlas

Homologous match to HL_5J7L_186

Geometric discrepancy: 0.093

The information below is about HL_5J7L_186

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_85367.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

4V9P|1|AA|C|2248
4V9P|1|AA|U|2249
4V9P|1|AA|G|2250
4V9P|1|AA|G|2251
4V9P|1|AA|G|2252
4V9P|1|AA|G|2253
4V9P|1|AA|C|2254
4V9P|1|AA|G|2255
4V9P|1|AA|G|2256

Current chains

Chain AA

23S rRNA

Nearby chains

Chain AM

50S ribosomal protein L16

Chain AW

50S ribosomal protein L27