3D structure

PDB id
4V9P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Control of ribosomal subunit rotation by elongation factor G
Experimental method
X-RAY DIFFRACTION
Resolution
2.9 Å

Loop

Sequence
AGCGAU
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4V9P_069 not in the Motif Atlas
Homologous match to HL_7A0S_068
Geometric discrepancy: 0.0951
The information below is about HL_7A0S_068
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.8
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
352

Unit IDs

4V9P|1|AA|A|2856
4V9P|1|AA|G|2857
4V9P|1|AA|C|2858
4V9P|1|AA|G|2859
4V9P|1|AA|A|2860
4V9P|1|AA|U|2861

Current chains

Chain AA
23S rRNA

Nearby chains

Chain AP
50S ribosomal protein L19

Coloring options:


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