HL_4V9P_083

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

4V9P|1|BA|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9P_083 not in the Motif Atlas

Geometric match to HL_5J7L_012

Geometric discrepancy: 0.184

The information below is about HL_5J7L_012

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

4V9P|1|BA|G|462
4V9P|1|BA|U|463
4V9P|1|BA|U|464
4V9P|1|BA|A|465
4V9P|1|BA|A|466
4V9P|1|BA|U|467
4V9P|1|BA|A|468
4V9P|1|BA|C|469
4V9P|1|BA|C|470

Current chains

Chain BA

16S rRNA

Nearby chains