HL_4V9P_116

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9P_116 not in the Motif Atlas

Homologous match to HL_7RQB_015

Geometric discrepancy: 0.0824

The information below is about HL_7RQB_015

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

4V9P|1|CA|C|462
4V9P|1|CA|G|463
4V9P|1|CA|U|464
4V9P|1|CA|G|465
4V9P|1|CA|A|466
4V9P|1|CA|G|467

Current chains

Chain CA

23S rRNA

Nearby chains

Chain C2

50S ribosomal protein L34

Chain CE

50S ribosomal protein L4