3D structure

PDB id
4V9P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Control of ribosomal subunit rotation by elongation factor G
Experimental method
X-RAY DIFFRACTION
Resolution
2.9 Å

Loop

Sequence
CAGG
Length
4 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4V9P_141 not in the Motif Atlas
Homologous match to HL_7A0S_039
Geometric discrepancy: 0.0796
The information below is about HL_7A0S_039
Detailed Annotation
Mini UNCG
Broad Annotation
No text annotation
Motif group
HL_90436.1
Basepair signature
cWW-F
Number of instances in this motif group
37

Unit IDs

4V9P|1|CA|C|1565
4V9P|1|CA|A|1566
4V9P|1|CA|G|1567
4V9P|1|CA|G|1568

Current chains

Chain CA
23S rRNA

Nearby chains

Chain CC
50S ribosomal protein L2

Coloring options:


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