HL_4V9P_180
3D structure
- PDB id
- 4V9P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Control of ribosomal subunit rotation by elongation factor G
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CUGAGAGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V9P_180 not in the Motif Atlas
- Geometric match to HL_7A0S_056
- Geometric discrepancy: 0.2202
- The information below is about HL_7A0S_056
- Detailed Annotation
- GNRA with extra cWW
- Broad Annotation
- GNRA with extra cWW
- Motif group
- HL_04259.3
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
4V9P|1|DA|C|295
4V9P|1|DA|U|296
4V9P|1|DA|G|297
4V9P|1|DA|A|298
4V9P|1|DA|G|299
4V9P|1|DA|A|300
4V9P|1|DA|G|301
4V9P|1|DA|G|302
Current chains
- Chain DA
- 16S rRNA
Nearby chains
- Chain DD
- 30S ribosomal protein S4
- Chain DE
- 30S ribosomal protein S5
- Chain DL
- 30S ribosomal protein S12
- Chain DQ
- 30S ribosomal protein S17
Coloring options: