HL_4V9P_273

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GAAGACGAC

Length

9 nucleotides

Bulged bases

4V9P|1|EA|A|2820

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9P_273 not in the Motif Atlas

Homologous match to HL_5J7L_201

Geometric discrepancy: 0.0809

The information below is about HL_5J7L_201

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.6

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

4V9P|1|EA|G|2819
4V9P|1|EA|A|2820
4V9P|1|EA|A|2821
4V9P|1|EA|G|2822
4V9P|1|EA|A|2823
4V9P|1|EA|C|2824
4V9P|1|EA|G|2825
4V9P|1|EA|A|2826
4V9P|1|EA|C|2827

Current chains

Chain EA

23S rRNA

Nearby chains

Chain ED

50S ribosomal protein L3

Chain EN

50S ribosomal protein L17

Chain EP

50S ribosomal protein L19