3D structure

PDB id
4V9P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Control of ribosomal subunit rotation by elongation factor G
Experimental method
X-RAY DIFFRACTION
Resolution
2.9 Å

Loop

Sequence
CGUAAUAG
Length
8 nucleotides
Bulged bases
4V9P|1|GA|A|1095
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4V9P_337 not in the Motif Atlas
Homologous match to HL_7RQB_030
Geometric discrepancy: 0.4609
The information below is about HL_7RQB_030
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V9P|1|GA|C|1092
4V9P|1|GA|G|1093
4V9P|1|GA|U|1094
4V9P|1|GA|A|1095
4V9P|1|GA|A|1096
4V9P|1|GA|U|1097
4V9P|1|GA|A|1098
4V9P|1|GA|G|1099

Current chains

Chain GA
23S rRNA

Nearby chains

Chain G4
50S ribosomal protein L36
Chain GG
50S ribosomal protein L6
Chain GI
50S ribosomal protein L11
Chain HV
elongation factor G

Coloring options:


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