HL_4V9P_350

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

4V9P|1|GA|U|1693

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9P_350 not in the Motif Atlas

Geometric match to HL_4LFB_011

Geometric discrepancy: 0.0659

The information below is about HL_4LFB_011

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

49

Unit IDs

4V9P|1|GA|C|1691
4V9P|1|GA|U|1692
4V9P|1|GA|U|1693
4V9P|1|GA|C|1694
4V9P|1|GA|G|1695
4V9P|1|GA|G|1696

Current chains

Chain GA

23S rRNA

Nearby chains

Chain GC

50S ribosomal protein L2

Chain HA

Small subunit ribosomal RNA; SSU rRNA