Loop HL_4V9P

3D structure

PDB id: 4V9P (explore in PDB, NAKB, or RNA 3D Hub)
Description: Control of ribosomal subunit rotation by elongation factor G
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å

Loop

Sequence: AGCCUUGAUGGAAGUGUGGACGCCAGUCUGCAUGGCUUUAAUGUU
Length: 45 nucleotides
Bulged bases: 4V9P|1|GA|G|2110, 4V9P|1|GA|G|2133, 4V9P|1|GA|G|2141, 4V9P|1|GA|G|2157, 4V9P|1|GA|U|2181
QA status: Missing nucleotides

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

4V9P|1|GA|A|2101
4V9P|1|GA|G|2102
4V9P|1|GA|C|2103
4V9P|1|GA|C|2104
4V9P|1|GA|U|2105
4V9P|1|GA|U|2106
4V9P|1|GA|G|2107
4V9P|1|GA|A|2108
4V9P|1|GA|U|2109
4V9P|1|GA|G|2110
4V9P|1|GA|G|2133
4V9P|1|GA|A|2134
4V9P|1|GA|A|2135
4V9P|1|GA|G|2136
4V9P|1|GA|U|2137
4V9P|1|GA|G|2138
4V9P|1|GA|U|2139
4V9P|1|GA|G|2140
4V9P|1|GA|G|2141
4V9P|1|GA|A|2142
4V9P|1|GA|C|2143
4V9P|1|GA|G|2144
4V9P|1|GA|C|2145
4V9P|1|GA|C|2146
4V9P|1|GA|A|2147
4V9P|1|GA|G|2148
4V9P|1|GA|U|2149
4V9P|1|GA|C|2150
4V9P|1|GA|U|2151
4V9P|1|GA|G|2152
4V9P|1|GA|C|2153
4V9P|1|GA|A|2154
4V9P|1|GA|U|2155
4V9P|1|GA|G|2156
4V9P|1|GA|G|2157
4V9P|1|GA|C|2179
4V9P|1|GA|U|2180
4V9P|1|GA|U|2181
4V9P|1|GA|U|2182
4V9P|1|GA|A|2183
4V9P|1|GA|A|2184
4V9P|1|GA|U|2185
4V9P|1|GA|G|2186
4V9P|1|GA|U|2187
4V9P|1|GA|U|2188

Current chains

Chain GA: 23S rRNA

Nearby chains

Chain CA: Large subunit ribosomal RNA; LSU rRNA
Chain DG: 30S ribosomal protein S7
Chain GH: 50S ribosomal protein L9

HL_4V9P_359