HL_4V9P_412

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GCGCAAGC

Length

8 nucleotides

Bulged bases

4V9P|1|AA|C|1870

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9P_412 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.3811

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.1

Basepair signature

cWW-cWW

Number of instances in this motif group

2

Unit IDs

4V9P|1|AA|G|1867
4V9P|1|AA|C|1868
4V9P|1|AA|G|1869
4V9P|1|AA|C|1870
4V9P|1|AA|A|1871
4V9P|1|AA|A|1872
4V9P|1|AA|G|1873
4V9P|1|AA|C|1874

Current chains

Chain AA

23S rRNA

Nearby chains