HL_4V9Q_114
3D structure
- PDB id
- 4V9Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- CUUUUUG
- Length
- 7 nucleotides
- Bulged bases
- 4V9Q|1|CA|U|162
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V9Q_114 not in the Motif Atlas
- Homologous match to HL_7A0S_005
- Geometric discrepancy: 0.4984
- The information below is about HL_7A0S_005
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
4V9Q|1|CA|C|155
4V9Q|1|CA|U|161
4V9Q|1|CA|U|162
4V9Q|1|CA|U|163
4V9Q|1|CA|U|164
4V9Q|1|CA|U|165
4V9Q|1|CA|G|171
Current chains
- Chain CA
- 23S ribosomal RNA
Nearby chains
- Chain CX
- 50S ribosomal protein L28
Coloring options: