HL_4V9Q_138

3D structure

PDB id

4V9Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CGAAGACAGCCUCACUGGUCGAG

Length

23 nucleotides

Bulged bases

4V9Q|1|CA|A|1046

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9Q|1|CA|C|1043
4V9Q|1|CA|G|1044
4V9Q|1|CA|A|1045
4V9Q|1|CA|A|1046
4V9Q|1|CA|G|1047
4V9Q|1|CA|A|1048
4V9Q|1|CA|C|1049
4V9Q|1|CA|A|1050
4V9Q|1|CA|G|1051
4V9Q|1|CA|C|1052
4V9Q|1|CA|C|1100
4V9Q|1|CA|U|1101
4V9Q|1|CA|C|1102
4V9Q|1|CA|A|1103
4V9Q|1|CA|C|1104
4V9Q|1|CA|U|1105
4V9Q|1|CA|G|1106
4V9Q|1|CA|G|1107
4V9Q|1|CA|U|1108
4V9Q|1|CA|C|1109
4V9Q|1|CA|G|1110
4V9Q|1|CA|A|1111
4V9Q|1|CA|G|1112

Current chains

Chain CA

23S ribosomal RNA

Nearby chains

Chain CH

50S ribosomal protein L6