HL_4V9S_064

3D structure

PDB id

4V9S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of antibiotic GE82832 bound to 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGAAGACAGCGGUCGAG

Length

17 nucleotides

Bulged bases

4V9S|1|BA|A|1092, 4V9S|1|BA|G|1152

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9S|1|BA|C|1089
4V9S|1|BA|G|1090
4V9S|1|BA|A|1091
4V9S|1|BA|A|1092
4V9S|1|BA|G|1093
4V9S|1|BA|A|1094
4V9S|1|BA|C|1095
4V9S|1|BA|A|1096
4V9S|1|BA|G|1097
4V9S|1|BA|C|1098
4V9S|1|BA|G|1152
4V9S|1|BA|G|1153
4V9S|1|BA|U|1154
4V9S|1|BA|C|1155
4V9S|1|BA|G|1156
4V9S|1|BA|A|1157
4V9S|1|BA|G|1158

Current chains

Chain BA

23S Ribosomal RNA

Nearby chains

Chain BH

50S Ribosomal Protein L6