HL_4V9S_211

3D structure

PDB id

4V9S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of antibiotic GE82832 bound to 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGCCCACCAGCC

Length

12 nucleotides

Bulged bases

4V9S|1|BA|A|934, 4V9S|1|BA|C|935, 4V9S|1|BA|C|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9S|1|BA|G|929
4V9S|1|BA|G|930
4V9S|1|BA|C|931
4V9S|1|BA|C|932
4V9S|1|BA|C|933
4V9S|1|BA|A|934
4V9S|1|BA|C|935
4V9S|1|BA|C|936
4V9S|1|BA|A|937
4V9S|1|BA|G|938
4V9S|1|BA|C|939
4V9S|1|BA|C|940

Current chains

Chain BA

23S Ribosomal RNA

Nearby chains

Chain AM

30S Ribosomal Protein S13